checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking how to create a pax tar archive... gnutar checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking for ar... ar checking for ranlib... ranlib checking the archiver (ar) interface... ar checking whether ln -s works... yes checking for flex... flex checking lex output file root... lex.yy checking lex library... none needed checking whether yytext is a pointer... no checking for flex... /usr/bin/flex checking for bison... bison checking for boostlib >= 1.36... yes checking how to run the C++ preprocessor... g++ -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking boost/graph/adjacency_list.hpp usability... yes checking boost/graph/adjacency_list.hpp presence... yes checking for boost/graph/adjacency_list.hpp... yes checking boost/algorithm/string/trim.hpp usability... yes checking boost/algorithm/string/trim.hpp presence... yes checking for boost/algorithm/string/trim.hpp... yes checking boost/algorithm/string/split.hpp usability... yes checking boost/algorithm/string/split.hpp presence... yes checking for boost/algorithm/string/split.hpp... yes checking boost/lexical_cast.hpp usability... yes checking boost/lexical_cast.hpp presence... yes checking for boost/lexical_cast.hpp... yes checking for dlopen in -ldl... yes checking for compress in -lz... yes checking for H5Fcreate in -lhdf5... yes checking matio.h usability... yes checking matio.h presence... yes checking for matio.h... yes checking for Mat_Open in -lmatio... yes checking for makeinfo... ${SHELL} /home/gianni/gitdynare/dynare/missing makeinfo checking for pdftex... pdftex checking for pdfetex... pdfetex checking for eplain... no checking for pdflatex... pdflatex checking for bibtex... bibtex checking for texi2html... no checking for latex2html... no checking for usability of class beamer... yes checking for doxygen... no checking for ctangle... no checking for cweave... no checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/x86_64-redhat-linux/6.2.1 -L/usr/lib/gcc/x86_64-redhat-linux/6.2.1/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/6.2.1/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... no checking for sgemm_ in -lmkl_intel_lp64... no checking for sgemm_ in -lmkl... no checking for sgemm_ in -framework Accelerate... no checking for sgemm_ in -lcxml... no checking for sgemm_ in -ldxml... no checking for sgemm_ in -lscs... no checking for sgemm_ in -lcomplib.sgimath... no checking for sgemm_ in -lblas... (cached) no checking for sgemm_ in -lblas... (cached) no checking if compiler needs -Werror to reject unknown flags... no checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... no checking whether pthreads work with -Kthread... no checking whether pthreads work with -kthread... no checking for the pthreads library -llthread... no checking whether pthreads work with -pthread... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for MATLAB prefix... /opt/matlab10 checking whether to enable MATLAB support... yes checking for octave... octave configure: Dynare is now configured for building the following components... Binaries (with "make"): Dynare preprocessor: yes Dynare++: no (missing one of: BLAS, LAPACK, MatIO) PDF documentation (with "make pdf"): Dynare reference manual: yes Dynare user guide: yes Dynare++ developer documentation: no (missing one of: cweave, pdftex, eplain) Beamer presentations: yes Various other documents: yes HTML documentation (with "make html"): Dynare reference manual: yes (but with ugly math formulas, missing texi2html or latex2html) Dynare preprocessor developer doc: no (missing doxygen) Dynare internal doc: no (Org export not enabled) Info documentation (with "make info"): yes Testsuites (run with "make check"): Dynare for Octave: yes Dynare++: no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating preprocessor/macro/Makefile config.status: creating preprocessor/Makefile config.status: creating doc/Makefile config.status: creating doc/preprocessor/Makefile config.status: creating doc/macroprocessor/Makefile config.status: creating doc/userguide/Makefile config.status: creating doc/parallel/Makefile config.status: creating doc/internals/Makefile config.status: creating doc/gsa/Makefile config.status: creating doc/dseries-and-reporting/Makefile config.status: creating tests/Makefile config.status: creating matlab/dynare_version.m config.status: creating windows/dynare-version.nsi config.status: creating dynare++/Makefile config.status: creating dynare++/parser/cc/Makefile config.status: creating dynare++/sylv/Makefile config.status: creating dynare++/sylv/cc/Makefile config.status: creating dynare++/sylv/testing/Makefile config.status: creating dynare++/tl/Makefile config.status: creating dynare++/tl/cc/Makefile config.status: creating dynare++/tl/testing/Makefile config.status: creating dynare++/doc/Makefile config.status: creating dynare++/utils/cc/Makefile config.status: creating dynare++/integ/Makefile config.status: creating dynare++/integ/cc/Makefile config.status: creating dynare++/integ/src/Makefile config.status: creating dynare++/integ/testing/Makefile config.status: creating dynare++/kord/Makefile config.status: creating dynare++/src/Makefile config.status: creating mex/sources/Makefile config.status: creating mex/sources/estimation/Makefile config.status: creating mex/sources/estimation/tests/Makefile config.status: creating mex/sources/estimation/libmat/Makefile config.status: creating mex/sources/estimation/libmat/tests/Makefile config.status: executing depfiles commands === configuring in mex/build/matlab (/home/gianni/gitdynare/dynare/mex/build/matlab) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/local' '--with-matio=/usr/lib/' '--with-matlab=/opt/matlab10/' 'MATLAB_VERSION=10.1' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking for MATLAB prefix... /opt/matlab10 checking whether to enable MATLAB support... yes checking for MATLAB version... 10.1 checking for MEX-file suffix... mexa64 setting MEX-file suffix to .mexa64 checking for MATLAB machine architecture... glnxa64 checking for a sed that does not truncate output... /usr/bin/sed checking for options to compile MEX for MATLAB... ok checking for gfortran... gfortran checking whether the Fortran 77 compiler works... yes checking for Fortran 77 compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking for ranlib... ranlib checking whether ln -s works... yes checking for ar... ar checking the archiver (ar) interface... ar checking if compiler needs -Werror to reject unknown flags... no checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for boostlib >= 1.36... yes checking how to run the C++ preprocessor... g++ -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking boost/random/linear_congruential.hpp usability... yes checking boost/random/linear_congruential.hpp presence... yes checking for boost/random/linear_congruential.hpp... yes checking boost/math/distributions/beta.hpp usability... yes checking boost/math/distributions/beta.hpp presence... yes checking for boost/math/distributions/beta.hpp... yes checking for dlopen in -ldl... yes checking how to run the C preprocessor... gcc -E checking gsl/gsl_cdf.h usability... yes checking gsl/gsl_cdf.h presence... yes checking for gsl/gsl_cdf.h... yes checking for cos in -lm... yes checking for cblas_dgemm in -lgslcblas... yes checking for gsl_cdf_ugaussian_P in -lgsl... yes checking for compress in -lz... yes checking for H5Fcreate in -lhdf5... yes checking matio.h usability... yes checking matio.h presence... yes checking for matio.h... yes checking for Mat_Open in -lmatio... yes checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/x86_64-redhat-linux/6.2.1 -L/usr/lib/gcc/x86_64-redhat-linux/6.2.1/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/6.2.1/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for sb02od_ in -lslicot64_pic... no configure: Dynare is now configured for building the following components... Binaries (with "make"): MEX files for MATLAB (except those listed below): yes k-order and dynare_simul MEX files for MATLAB: yes MS-SBVAR MEX files for MATLAB: yes Kalman Steady State MEX file for MATLAB: no (missing SLICOT) M2HTML documentation: no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating mjdgges/Makefile config.status: creating kronecker/Makefile config.status: creating bytecode/Makefile config.status: creating libdynare++/Makefile config.status: creating gensylv/Makefile config.status: creating k_order_perturbation/Makefile config.status: creating dynare_simul_/Makefile config.status: creating estimation/Makefile config.status: creating kalman_steady_state/Makefile config.status: creating ms_sbvar/Makefile config.status: creating block_kalman_filter/Makefile config.status: creating sobol/Makefile config.status: creating local_state_space_iterations/Makefile config.status: executing depfiles commands === configuring in mex/build/octave (/home/gianni/gitdynare/dynare/mex/build/octave) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/local' '--with-matio=/usr/lib/' '--with-matlab=/opt/matlab10/' 'MATLAB_VERSION=10.1' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for mkoctfile... no checking for gfortran... gfortran checking whether the Fortran 77 compiler works... yes checking for Fortran 77 compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking for ranlib... ranlib checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking whether ln -s works... yes checking for ar... ar checking the archiver (ar) interface... ar checking if compiler needs -Werror to reject unknown flags... no checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... no checking whether pthreads work with -Kthread... no checking whether pthreads work with -kthread... no checking for the pthreads library -llthread... no checking whether pthreads work with -pthread... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for boostlib >= 1.36... yes checking how to run the C++ preprocessor... g++ -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking boost/random/linear_congruential.hpp usability... yes checking boost/random/linear_congruential.hpp presence... yes checking for boost/random/linear_congruential.hpp... yes checking boost/math/distributions/beta.hpp usability... yes checking boost/math/distributions/beta.hpp presence... yes checking for boost/math/distributions/beta.hpp... yes checking for dlopen in -ldl... yes checking how to run the C preprocessor... gcc -E checking gsl/gsl_cdf.h usability... yes checking gsl/gsl_cdf.h presence... yes checking for gsl/gsl_cdf.h... yes checking for cos in -lm... yes checking for cblas_dgemm in -lgslcblas... yes checking for gsl_cdf_ugaussian_P in -lgsl... yes checking for compress in -lz... yes checking for H5Fcreate in -lhdf5... yes checking matio.h usability... yes checking matio.h presence... yes checking for matio.h... yes checking for Mat_Open in -lmatio... yes checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/x86_64-redhat-linux/6.2.1 -L/usr/lib/gcc/x86_64-redhat-linux/6.2.1/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/6.2.1/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for sb02od_ in -lslicot... no checking for sb02od_ in -lslicot_pic... no checking for umfpack_dl_defaults in -lumfpack... yes configure: Dynare is now configured for building the following components... Binaries (with "make"): MEX files for Octave (except those listed below): no (missing mkoctfile) MS-SBVAR MEX files for Octave: no (missing GSL or MatIO library) Kalman Steady State MEX file for Octave: no (missing SLICOT) Estimation, k-order and dynare_simul MEX for Octave: no (missing MatIO library) Linsolve for Octave: no (Octave >= 3.8) Ordschur for Octave: no (Octave >= 4.0) checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating mjdgges/Makefile config.status: creating kronecker/Makefile config.status: creating bytecode/Makefile config.status: creating libdynare++/Makefile config.status: creating gensylv/Makefile config.status: creating k_order_perturbation/Makefile config.status: creating dynare_simul_/Makefile config.status: creating estimation/Makefile config.status: creating qzcomplex/Makefile config.status: creating ordschur/Makefile config.status: creating kalman_steady_state/Makefile config.status: creating ms_sbvar/Makefile config.status: creating block_kalman_filter/Makefile config.status: creating sobol/Makefile config.status: creating local_state_space_iterations/Makefile config.status: creating linsolve/Makefile config.status: executing depfiles commands