This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by dynare configure 4.4.2, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --disable-option-checking --prefix=/sscc/opt/dynare-4.4.2 --with-boost=/sscc/opt/boost.1.42.0 --with-boost-libdir=/sscc/opt/boost.1.42.0/lib --with-blas=-lacml -lacml_mv --with-matlab=/sscc/opt/matlab.r2014a MATLAB_VERSION=r2014a --with-matio=/sscc/opt/matio-1.5.2 --enable-openmp --disable-octave CFLAGS=-O3 LIBS=-L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz CXXFLAGS=-O3 F77=gfortran --cache-file=/dev/null --srcdir=. ## --------- ## ## Platform. ## ## --------- ## hostname = seldon uname -m = x86_64 uname -r = 2.6.32-431.17.1.el6.x86_64 uname -s = Linux uname -v = #1 SMP Fri Apr 11 17:27:00 EDT 2014 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /sscc/opt/matlab.r2014a/bin PATH: /sscc/opt/gsl/1.16/bin PATH: /sscc/opt/texlive/2014/bin/x86_64-linux PATH: /sscc/opt/texi2html/1.82/bin PATH: /sscc/opt/texinfo-4.13/bin PATH: /sscc/opt/gcc-4.7.3/bin PATH: /sscc/opt/matio-1.5.2/bin PATH: /usr/lib64/qt-3.3/bin PATH: /opt/pbs/default/sbin PATH: /opt/pbs/default/bin PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /sbin PATH: /bin PATH: /usr/sbin PATH: /usr/bin PATH: /usr/local/rrdtool-1.3.8/bin PATH: /root/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2273: checking for a BSD-compatible install configure:2341: result: /usr/bin/install -c configure:2352: checking whether build environment is sane configure:2402: result: yes configure:2543: checking for a thread-safe mkdir -p configure:2582: result: /bin/mkdir -p configure:2595: checking for gawk configure:2611: found /bin/gawk configure:2622: result: gawk configure:2633: checking whether make sets $(MAKE) configure:2655: result: yes configure:2740: checking build system type configure:2754: result: x86_64-unknown-linux-gnu configure:2774: checking host system type configure:2787: result: x86_64-unknown-linux-gnu configure:2831: checking for MATLAB prefix configure:2860: result: /sscc/opt/matlab.r2014a configure:2868: checking whether to enable MATLAB support configure:2882: result: yes configure:2895: checking for MATLAB version configure:2960: result: r2014a configure:2975: checking for MEX-file suffix configure:3032: result: mexa64 configure:3044: result: setting MEX-file suffix to .mexa64 configure:3053: checking for MATLAB machine architecture configure:3089: result: glnxa64 configure:3096: checking for a sed that does not truncate output configure:3160: result: /bin/sed configure:3206: checking for options to compile MEX for MATLAB configure:3418: result: ok configure:3560: checking for Fortran 77 compiler version configure:3569: gfortran --version >&5 GNU Fortran (GCC) 4.7.3 Copyright (C) 2012 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:3580: $? = 0 configure:3569: gfortran -v >&5 Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/sscc/opt/gcc-4.7.3/libexec/gcc/x86_64-redhat-linux-gnu/4.7.3/lto-wrapper Target: x86_64-redhat-linux-gnu Configured with: ../gcc-4.7.3/configure --prefix=/sscc/opt/gcc-4.7.3 --disable-werror --build=x86_64-redhat-linux-gnu --host=x86_64-redhat-linux-gnu --target=x86_64-redhat-linux-gnu --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-languages=c,c++,objc,obj-c++,java,fortran --disable-dssi --enable-plugin --with-cpu=generic --with-gmp=/sscc/opt/gmp/5.1.3 --with-mpfr=/sscc/opt/mpfr/3.1.2 --with-mpc=/sscc/opt/mpc/1.0.1 Thread model: posix gcc version 4.7.3 (GCC) configure:3580: $? = 0 configure:3569: gfortran -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:3580: $? = 1 configure:3569: gfortran -qversion >&5 gfortran: error: unrecognized command line option '-qversion' gfortran: fatal error: no input files compilation terminated. configure:3580: $? = 1 configure:3595: checking whether the Fortran 77 compiler works configure:3617: gfortran -fPIC -g -O2 -fexceptions -fdefault-integer-8 -Wall conftest.f -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz >&5 configure:3621: $? = 0 configure:3669: result: yes configure:3672: checking for Fortran 77 compiler default output file name configure:3674: result: a.out configure:3680: checking for suffix of executables configure:3687: gfortran -o conftest -fPIC -g -O2 -fexceptions -fdefault-integer-8 -Wall conftest.f -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz >&5 configure:3691: $? = 0 configure:3713: result: configure:3729: checking whether we are cross compiling configure:3737: gfortran -o conftest -fPIC -g -O2 -fexceptions -fdefault-integer-8 -Wall conftest.f -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz >&5 configure:3741: $? = 0 configure:3748: ./conftest configure:3752: $? = 0 configure:3767: result: no configure:3772: checking for suffix of object files configure:3788: gfortran -c -fPIC -g -O2 -fexceptions -fdefault-integer-8 -Wall conftest.f >&5 configure:3792: $? = 0 configure:3813: result: o configure:3821: checking whether we are using the GNU Fortran 77 compiler configure:3834: gfortran -c -fPIC -g -O2 -fexceptions -fdefault-integer-8 -Wall conftest.F >&5 configure:3834: $? = 0 configure:3843: result: yes configure:3849: checking whether gfortran accepts -g configure:3860: gfortran -c -g conftest.f >&5 configure:3860: $? = 0 configure:3868: result: yes configure:3945: checking for gcc configure:3961: found /sscc/opt/gcc-4.7.3/bin/gcc configure:3972: result: gcc configure:4201: checking for C compiler version configure:4210: gcc --version >&5 gcc (GCC) 4.7.3 Copyright (C) 2012 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:4221: $? = 0 configure:4210: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/sscc/opt/gcc-4.7.3/libexec/gcc/x86_64-redhat-linux-gnu/4.7.3/lto-wrapper Target: x86_64-redhat-linux-gnu Configured with: ../gcc-4.7.3/configure --prefix=/sscc/opt/gcc-4.7.3 --disable-werror --build=x86_64-redhat-linux-gnu --host=x86_64-redhat-linux-gnu --target=x86_64-redhat-linux-gnu --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-languages=c,c++,objc,obj-c++,java,fortran --disable-dssi --enable-plugin --with-cpu=generic --with-gmp=/sscc/opt/gmp/5.1.3 --with-mpfr=/sscc/opt/mpfr/3.1.2 --with-mpc=/sscc/opt/mpc/1.0.1 Thread model: posix gcc version 4.7.3 (GCC) configure:4221: $? = 0 configure:4210: gcc -V >&5 gcc: error: unrecognized command line option '-V' gcc: fatal error: no input files compilation terminated. configure:4221: $? = 1 configure:4210: gcc -qversion >&5 gcc: error: unrecognized command line option '-qversion' gcc: fatal error: no input files compilation terminated. configure:4221: $? = 1 configure:4225: checking whether we are using the GNU C compiler configure:4244: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:4244: $? = 0 configure:4253: result: yes configure:4262: checking whether gcc accepts -g configure:4282: gcc -c -g conftest.c >&5 configure:4282: $? = 0 configure:4323: result: yes configure:4340: checking for gcc option to accept ISO C89 configure:4403: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:4403: $? = 0 configure:4416: result: none needed configure:4447: checking for style of include used by make configure:4475: result: GNU configure:4501: checking dependency style of gcc configure:4612: result: gcc3 configure:4685: checking for g++ configure:4701: found /sscc/opt/gcc-4.7.3/bin/g++ configure:4712: result: g++ configure:4739: checking for C++ compiler version configure:4748: g++ --version >&5 g++ (GCC) 4.7.3 Copyright (C) 2012 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:4759: $? = 0 configure:4748: g++ -v >&5 Using built-in specs. COLLECT_GCC=g++ COLLECT_LTO_WRAPPER=/sscc/opt/gcc-4.7.3/libexec/gcc/x86_64-redhat-linux-gnu/4.7.3/lto-wrapper Target: x86_64-redhat-linux-gnu Configured with: ../gcc-4.7.3/configure --prefix=/sscc/opt/gcc-4.7.3 --disable-werror --build=x86_64-redhat-linux-gnu --host=x86_64-redhat-linux-gnu --target=x86_64-redhat-linux-gnu --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-languages=c,c++,objc,obj-c++,java,fortran --disable-dssi --enable-plugin --with-cpu=generic --with-gmp=/sscc/opt/gmp/5.1.3 --with-mpfr=/sscc/opt/mpfr/3.1.2 --with-mpc=/sscc/opt/mpc/1.0.1 Thread model: posix gcc version 4.7.3 (GCC) configure:4759: $? = 0 configure:4748: g++ -V >&5 g++: error: unrecognized command line option '-V' g++: fatal error: no input files compilation terminated. configure:4759: $? = 1 configure:4748: g++ -qversion >&5 g++: error: unrecognized command line option '-qversion' g++: fatal error: no input files compilation terminated. configure:4759: $? = 1 configure:4763: checking whether we are using the GNU C++ compiler configure:4782: g++ -c -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.cpp >&5 configure:4782: $? = 0 configure:4791: result: yes configure:4800: checking whether g++ accepts -g configure:4820: g++ -c -g conftest.cpp >&5 configure:4820: $? = 0 configure:4861: result: yes configure:4886: checking dependency style of g++ configure:4997: result: gcc3 configure:5055: checking for ranlib configure:5071: found /usr/bin/ranlib configure:5082: result: ranlib configure:5104: checking whether ln -s works configure:5108: result: yes configure:5175: checking for ar configure:5191: found /usr/bin/ar configure:5202: result: ar configure:5228: checking the archiver (ar) interface configure:5238: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:5238: $? = 0 configure:5240: ar cru libconftest.a conftest.o >&5 configure:5243: $? = 0 configure:5266: result: ar configure:5462: checking for the pthreads library -lpthreads configure:5495: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c -lpthreads -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz >&5 conftest.c: In function 'main': conftest.c:17:22: warning: null argument where non-null required (argument 1) [-Wnonnull] conftest.c:18:22: warning: null argument where non-null required (argument 1) [-Wnonnull] conftest.c:18:22: warning: null argument where non-null required (argument 3) [-Wnonnull] conftest.c:16:27: warning: 'th' is used uninitialized in this function [-Wuninitialized] /usr/bin/ld: cannot find -lpthreads collect2: error: ld returned 1 exit status configure:5495: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "dynare" | #define PACKAGE_TARNAME "dynare" | #define PACKAGE_VERSION "4.4.2" | #define PACKAGE_STRING "dynare 4.4.2" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "dynare" | #define VERSION "4.4.2" | #define HAVE_MATLAB 1 | /* end confdefs.h. */ | #include | int | main () | { | pthread_t th; pthread_join(th, 0); | pthread_attr_init(0); pthread_cleanup_push(0, 0); | pthread_create(0,0,0,0); pthread_cleanup_pop(0); | ; | return 0; | } configure:5504: result: no configure:5407: checking whether pthreads work without any flags configure:5495: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz >&5 conftest.c: In function 'main': conftest.c:17:22: warning: null argument where non-null required (argument 1) [-Wnonnull] conftest.c:18:22: warning: null argument where non-null required (argument 1) [-Wnonnull] conftest.c:18:22: warning: null argument where non-null required (argument 3) [-Wnonnull] conftest.c:16:27: warning: 'th' is used uninitialized in this function [-Wuninitialized] configure:5495: $? = 0 configure:5504: result: yes configure:5523: checking for joinable pthread attribute configure:5538: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz >&5 configure:5538: $? = 0 configure:5544: result: PTHREAD_CREATE_JOINABLE configure:5554: checking if more special flags are required for pthreads configure:5561: result: no configure:5646: checking for dlopen in -ldl configure:5671: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c -ldl -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz >&5 configure:5671: $? = 0 configure:5680: result: yes configure:5693: checking how to run the C preprocessor configure:5724: gcc -E conftest.c configure:5724: $? = 0 configure:5738: gcc -E conftest.c conftest.c:13:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:5738: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "dynare" | #define PACKAGE_TARNAME "dynare" | #define PACKAGE_VERSION "4.4.2" | #define PACKAGE_STRING "dynare 4.4.2" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "dynare" | #define VERSION "4.4.2" | #define HAVE_MATLAB 1 | #define HAVE_PTHREAD 1 | /* end confdefs.h. */ | #include configure:5763: result: gcc -E configure:5783: gcc -E conftest.c configure:5783: $? = 0 configure:5797: gcc -E conftest.c conftest.c:13:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:5797: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "dynare" | #define PACKAGE_TARNAME "dynare" | #define PACKAGE_VERSION "4.4.2" | #define PACKAGE_STRING "dynare 4.4.2" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "dynare" | #define VERSION "4.4.2" | #define HAVE_MATLAB 1 | #define HAVE_PTHREAD 1 | /* end confdefs.h. */ | #include configure:5826: checking for grep that handles long lines and -e configure:5884: result: /bin/grep configure:5889: checking for egrep configure:5951: result: /bin/grep -E configure:5956: checking for ANSI C header files configure:5976: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:5976: $? = 0 configure:6049: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz >&5 configure:6049: $? = 0 configure:6049: ./conftest configure:6049: $? = 0 configure:6060: result: yes configure:6073: checking for sys/types.h configure:6073: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:6073: $? = 0 configure:6073: result: yes configure:6073: checking for sys/stat.h configure:6073: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:6073: $? = 0 configure:6073: result: yes configure:6073: checking for stdlib.h configure:6073: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:6073: $? = 0 configure:6073: result: yes configure:6073: checking for string.h configure:6073: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:6073: $? = 0 configure:6073: result: yes configure:6073: checking for memory.h configure:6073: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:6073: $? = 0 configure:6073: result: yes configure:6073: checking for strings.h configure:6073: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:6073: $? = 0 configure:6073: result: yes configure:6073: checking for inttypes.h configure:6073: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:6073: $? = 0 configure:6073: result: yes configure:6073: checking for stdint.h configure:6073: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:6073: $? = 0 configure:6073: result: yes configure:6073: checking for unistd.h configure:6073: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:6073: $? = 0 configure:6073: result: yes configure:6119: checking gsl/gsl_cdf.h usability configure:6119: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c >&5 configure:6119: $? = 0 configure:6119: result: yes configure:6119: checking gsl/gsl_cdf.h presence configure:6119: gcc -E conftest.c configure:6119: $? = 0 configure:6119: result: yes configure:6119: checking for gsl/gsl_cdf.h configure:6119: result: yes configure:6134: checking for cos in -lm configure:6159: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c -lm >&5 conftest.c:30:6: warning: conflicting types for built-in function 'cos' [enabled by default] configure:6159: $? = 0 configure:6168: result: yes configure:6179: checking for cblas_dgemm in -lgslcblas configure:6204: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c -lgslcblas -lm >&5 configure:6204: $? = 0 configure:6213: result: yes configure:6221: checking for gsl_cdf_ugaussian_P in -lgsl configure:6246: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c -lgsl -lgslcblas -lm >&5 configure:6246: $? = 0 configure:6255: result: yes configure:6317: checking for compress in -lz configure:6342: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses -I/sscc/opt/matio-1.5.2/include -L/sscc/opt/matio-1.5.2/lib conftest.c -lz >&5 configure:6342: $? = 0 configure:6351: result: yes configure:6363: checking matio.h usability configure:6363: gcc -c -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses -I/sscc/opt/matio-1.5.2/include conftest.c >&5 configure:6363: $? = 0 configure:6363: result: yes configure:6363: checking matio.h presence configure:6363: gcc -E -I/sscc/opt/matio-1.5.2/include conftest.c configure:6363: $? = 0 configure:6363: result: yes configure:6363: checking for matio.h configure:6363: result: yes configure:6371: checking for Mat_Open in -lmatio configure:6396: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses -I/sscc/opt/matio-1.5.2/include -L/sscc/opt/matio-1.5.2/lib conftest.c -lmatio -lz >&5 /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5P_CLS_FILE_CREATE_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_NATIVE_SHORT_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Pcreate' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Tcopy' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Aget_space' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Sget_simple_extent_dims' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Eset_auto2' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Sget_simple_extent_ndims' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Aget_type' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Fcreate' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Sclose' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Rcreate' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_NATIVE_SCHAR_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Aopen_name' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Tget_class' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Acreate2' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Aclose' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_NATIVE_ULONG_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Pset_deflate' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_C_S1_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Dopen2' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Iget_type' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Dget_type' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_NATIVE_FLOAT_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Dwrite' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_NATIVE_HSIZE_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Screate_simple' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Aread' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5check_version' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Iget_name' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Gcreate2' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Tget_size' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Gget_objname_by_idx' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Tvlen_create' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_NATIVE_UCHAR_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Eget_auto2' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Screate' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Sselect_elements' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Gopen2' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Gget_objtype_by_idx' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Dget_space' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Dclose' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Eprint1' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_NATIVE_LONG_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Pset_userblock' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Pclose' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_NATIVE_UINT_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Tinsert' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Rdereference' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Sselect_hyperslab' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_NATIVE_INT_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Gclose' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Iinc_ref' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Awrite' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5open' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Dread' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Tcreate' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Gget_num_objs' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Tset_size' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5P_CLS_DATASET_CREATE_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_NATIVE_USHORT_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Dvlen_reclaim' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Tclose' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Fopen' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Pset_chunk' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Fclose' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_NATIVE_DOUBLE_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_NATIVE_ULLONG_g' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5Dcreate2' /sscc/opt/matio-1.5.2/lib/libmatio.so: undefined reference to `H5T_STD_REF_OBJ_g' collect2: error: ld returned 1 exit status configure:6396: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "dynare" | #define PACKAGE_TARNAME "dynare" | #define PACKAGE_VERSION "4.4.2" | #define PACKAGE_STRING "dynare 4.4.2" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "dynare" | #define VERSION "4.4.2" | #define HAVE_MATLAB 1 | #define HAVE_PTHREAD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBZ 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char Mat_Open (); | int | main () | { | return Mat_Open (); | ; | return 0; | } configure:6405: result: no configure:6437: checking how to get verbose linking output from gfortran configure:6447: gfortran -c -fPIC -g -O2 -fexceptions -fdefault-integer-8 -Wall conftest.f >&5 configure:6447: $? = 0 configure:6465: gfortran -o conftest -fPIC -g -O2 -fexceptions -fdefault-integer-8 -Wall -v conftest.f -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz Using built-in specs. Target: x86_64-redhat-linux-gnu Thread model: posix gcc version 4.7.3 (GCC) /sscc/opt/gcc-4.7.3/libexec/gcc/x86_64-redhat-linux-gnu/4.7.3/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -Wall -version -fPIC -fexceptions -fdefault-integer-8 -fintrinsic-modules-path /sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/finclude -o /tmp/root/cc4jQ7qN.s GNU Fortran (GCC) version 4.7.3 (x86_64-redhat-linux-gnu) compiled by GNU C version 4.7.3, GMP version 5.1.3, MPFR version 3.1.2, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran (GCC) version 4.7.3 (x86_64-redhat-linux-gnu) compiled by GNU C version 4.7.3, GMP version 5.1.3, MPFR version 3.1.2, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --64 -o /tmp/root/ccR89t7p.o /tmp/root/cc4jQ7qN.s GNU assembler version 2.20.51.0.2 (x86_64-redhat-linux) using BFD version version 2.20.51.0.2-5.36.el6 20100205 Reading specs from /sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../../../lib64/libgfortran.spec rename spec lib to liborig /sscc/opt/gcc-4.7.3/libexec/gcc/x86_64-redhat-linux-gnu/4.7.3/collect2 --eh-frame-hdr -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/../lib64/crt1.o /usr/lib/../lib64/crti.o /sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/crtbegin.o -L/opt/acml4.4.0/gfortran64/lib -L/sscc/opt/matio-1.5.2/lib -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../.. /tmp/root/ccR89t7p.o -lacml -lacml_mv -lmatio -lhdf5 -lz -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/crtend.o /usr/lib/../lib64/crtn.o configure:6548: result: -v configure:6550: checking for Fortran 77 libraries of gfortran configure:6573: gfortran -o conftest -fPIC -g -O2 -fexceptions -fdefault-integer-8 -Wall -v conftest.f -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz Using built-in specs. Target: x86_64-redhat-linux-gnu Thread model: posix gcc version 4.7.3 (GCC) /sscc/opt/gcc-4.7.3/libexec/gcc/x86_64-redhat-linux-gnu/4.7.3/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -Wall -version -fPIC -fexceptions -fdefault-integer-8 -fintrinsic-modules-path /sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/finclude -o /tmp/root/ccPS0YHZ.s GNU Fortran (GCC) version 4.7.3 (x86_64-redhat-linux-gnu) compiled by GNU C version 4.7.3, GMP version 5.1.3, MPFR version 3.1.2, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran (GCC) version 4.7.3 (x86_64-redhat-linux-gnu) compiled by GNU C version 4.7.3, GMP version 5.1.3, MPFR version 3.1.2, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --64 -o /tmp/root/cccp5nOC.o /tmp/root/ccPS0YHZ.s GNU assembler version 2.20.51.0.2 (x86_64-redhat-linux) using BFD version version 2.20.51.0.2-5.36.el6 20100205 Reading specs from /sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../../../lib64/libgfortran.spec rename spec lib to liborig /sscc/opt/gcc-4.7.3/libexec/gcc/x86_64-redhat-linux-gnu/4.7.3/collect2 --eh-frame-hdr -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/../lib64/crt1.o /usr/lib/../lib64/crti.o /sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/crtbegin.o -L/opt/acml4.4.0/gfortran64/lib -L/sscc/opt/matio-1.5.2/lib -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../.. /tmp/root/cccp5nOC.o -lacml -lacml_mv -lmatio -lhdf5 -lz -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/crtend.o /usr/lib/../lib64/crtn.o configure:6769: result: -L/opt/acml4.4.0/gfortran64/lib -L/sscc/opt/matio-1.5.2/lib -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../.. -lacml -lacml_mv -lmatio -lhdf5 -lz -lgfortran -lm -lquadmath configure:6785: checking for dummy main to link with Fortran 77 libraries configure:6819: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz -L/opt/acml4.4.0/gfortran64/lib -L/sscc/opt/matio-1.5.2/lib -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../.. -lacml -lacml_mv -lmatio -lhdf5 -lz -lgfortran -lm -lquadmath >&5 configure:6819: $? = 0 configure:6864: result: none configure:6897: checking for Fortran 77 name-mangling scheme configure:6910: gfortran -c -fPIC -g -O2 -fexceptions -fdefault-integer-8 -Wall conftest.f >&5 configure:6910: $? = 0 configure:6951: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c cfortran_test.o -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz -L/opt/acml4.4.0/gfortran64/lib -L/sscc/opt/matio-1.5.2/lib -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../.. -lacml -lacml_mv -lmatio -lhdf5 -lz -lgfortran -lm -lquadmath >&5 /tmp/root/cc7Ka0i9.o: In function `main': /sscc/opt/dynare-4.4.2/mex/build/matlab/conftest.c:44: undefined reference to `foobar' collect2: error: ld returned 1 exit status configure:6951: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "dynare" | #define PACKAGE_TARNAME "dynare" | #define PACKAGE_VERSION "4.4.2" | #define PACKAGE_STRING "dynare 4.4.2" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "dynare" | #define VERSION "4.4.2" | #define HAVE_MATLAB 1 | #define HAVE_PTHREAD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBZ 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char foobar (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | return foobar (); | ; | return 0; | } configure:6951: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c cfortran_test.o -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz -L/opt/acml4.4.0/gfortran64/lib -L/sscc/opt/matio-1.5.2/lib -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../.. -lacml -lacml_mv -lmatio -lhdf5 -lz -lgfortran -lm -lquadmath >&5 configure:6951: $? = 0 configure:7009: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses conftest.c cfortran_test.o -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz -L/opt/acml4.4.0/gfortran64/lib -L/sscc/opt/matio-1.5.2/lib -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../.. -lacml -lacml_mv -lmatio -lhdf5 -lz -lgfortran -lm -lquadmath >&5 configure:7009: $? = 0 configure:7051: result: lower case, underscore, no extra underscore configure:7152: checking for sb02od_ in -lslicot64_pic configure:7185: gcc -o conftest -fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses -shared -Wl,--no-undefined -Wl,-rpath-link,/sscc/opt/matlab.r2014a/bin/glnxa64 -L/sscc/opt/matlab.r2014a/bin/glnxa64 conftest.c -lslicot64_pic -lmx -lmex -lmat -lm -lstdc++ -lmwlapack -lmwblas -L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz >&5 /usr/bin/ld: cannot find -lslicot64_pic collect2: error: ld returned 1 exit status configure:7185: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "dynare" | #define PACKAGE_TARNAME "dynare" | #define PACKAGE_VERSION "4.4.2" | #define PACKAGE_STRING "dynare 4.4.2" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "dynare" | #define VERSION "4.4.2" | #define HAVE_MATLAB 1 | #define HAVE_PTHREAD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBZ 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char sb02od_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | return sb02od_ (); | ; | return 0; | } configure:7195: result: no configure:7464: Dynare is now configured for building the following components... Binaries (with "make"): MEX files for MATLAB (except those listed below): yes k-order and dynare_simul MEX files for MATLAB: no (missing MatIO library) MS-SBVAR MEX files for MATLAB: yes Kalman Steady State MEX file for MATLAB: no (missing SLICOT) M2HTML documentation: no configure:7671: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by dynare config.status 4.4.2, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on seldon config.status:845: creating Makefile config.status:845: creating mjdgges/Makefile config.status:845: creating kronecker/Makefile config.status:845: creating bytecode/Makefile config.status:845: creating libdynare++/Makefile config.status:845: creating gensylv/Makefile config.status:845: creating k_order_perturbation/Makefile config.status:845: creating dynare_simul_/Makefile config.status:845: creating kalman_steady_state/Makefile config.status:845: creating ms_sbvar/Makefile config.status:845: creating block_kalman_filter/Makefile config.status:845: creating sobol/Makefile config.status:845: creating local_state_space_iterations/Makefile config.status:1017: executing depfiles commands ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-unknown-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value=-O3 ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXFLAGS_set=set ac_cv_env_CXXFLAGS_value=-O3 ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_F77_set=set ac_cv_env_F77_value=gfortran ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set=set ac_cv_env_LIBS_value='-L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz' ac_cv_env_MATLAB_VERSION_set=set ac_cv_env_MATLAB_VERSION_value=r2014a ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=yes ac_cv_f77_dummy_main=none ac_cv_f77_libs=' -L/opt/acml4.4.0/gfortran64/lib -L/sscc/opt/matio-1.5.2/lib -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../.. -lacml -lacml_mv -lmatio -lhdf5 -lz -lgfortran -lm -lquadmath' ac_cv_f77_mangling='lower case, underscore, no extra underscore' ac_cv_fortran_dummy_main=none ac_cv_header_gsl_gsl_cdf_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_matio_h=yes ac_cv_header_memory_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-unknown-linux-gnu ac_cv_latex_class_beamer=yes ac_cv_lib_dl_dlopen=yes ac_cv_lib_gsl_gsl_cdf_ugaussian_P=yes ac_cv_lib_gslcblas_cblas_dgemm=yes ac_cv_lib_m_cos=yes ac_cv_lib_matio_Mat_Open=no ac_cv_lib_slicot64_pic_sb02od_=no ac_cv_lib_z_compress=yes ac_cv_objext=o ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_GREP=/bin/grep ac_cv_path_SED=/bin/sed ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_CPP='gcc -E' ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_ac_ct_CXX=g++ ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_f77_g=yes ac_cv_prog_f77_v=-v ac_cv_prog_make_make_set=yes am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 am_cv_ar_interface=ar ax_cv_matlab=/sscc/opt/matlab.r2014a ax_cv_matlab_arch=glnxa64 ax_cv_mexext=mexa64 ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /sscc/opt/dynare-4.4.2/mex/build/matlab/missing --run aclocal-1.11' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AR='ar' AUTOCONF='${SHELL} /sscc/opt/dynare-4.4.2/mex/build/matlab/missing --run autoconf' AUTOHEADER='${SHELL} /sscc/opt/dynare-4.4.2/mex/build/matlab/missing --run autoheader' AUTOMAKE='${SHELL} /sscc/opt/dynare-4.4.2/mex/build/matlab/missing --run automake-1.11' AWK='gawk' CC='gcc' CCDEPMODE='depmode=gcc3' CFLAGS='-fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses -fopenmp' CPP='gcc -E' CPPFLAGS=' -DUSE_OMP' CPPFLAGS_MATIO='-I/sscc/opt/matio-1.5.2/include' CXX='g++' CXXDEPMODE='depmode=gcc3' CXXFLAGS='-fPIC -pthread -g -O2 -fno-omit-frame-pointer -Wall -Wno-parentheses -fopenmp' CYGPATH_W='echo' DEFS='-DPACKAGE_NAME=\"dynare\" -DPACKAGE_TARNAME=\"dynare\" -DPACKAGE_VERSION=\"4.4.2\" -DPACKAGE_STRING=\"dynare\ 4.4.2\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"dynare\" -DVERSION=\"4.4.2\" -DHAVE_MATLAB=1 -DHAVE_PTHREAD=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_LIBM=1 -DHAVE_LIBZ=1' DEPDIR='.deps' DO_SOMETHING_FALSE='#' DO_SOMETHING_TRUE='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' EXEEXT='' F77='gfortran' FFLAGS='-fPIC -g -O2 -fexceptions -fdefault-integer-8 -Wall' FLIBS=' -L/opt/acml4.4.0/gfortran64/lib -L/sscc/opt/matio-1.5.2/lib -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/sscc/opt/gcc-4.7.3/lib/gcc/x86_64-redhat-linux-gnu/4.7.3/../../.. -lacml -lacml_mv -lmatio -lhdf5 -lz -lgfortran -lm -lquadmath' GREP='/bin/grep' GSL_CPPFLAGS='' GSL_LDFLAGS='' GSL_LIBS='-lgsl -lgslcblas -lm ' HAVE_GSL_FALSE='#' HAVE_GSL_TRUE='' HAVE_M2HTML_FALSE='' HAVE_M2HTML_TRUE='#' HAVE_MATIO_FALSE='' HAVE_MATIO_TRUE='#' HAVE_SLICOT_FALSE='' HAVE_SLICOT_TRUE='#' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LDFLAGS='' LDFLAGS_MATIO='-L/sscc/opt/matio-1.5.2/lib' LDFLAGS_SLICOT='' LIBADD_DLOPEN='-ldl' LIBADD_MATIO='' LIBADD_SLICOT='' LIBOBJS='' LIBS='-L/opt/acml4.4.0/gfortran64/lib -lacml -lacml_mv -L/sscc/opt/matio-1.5.2/lib -lmatio -lhdf5 -lz' LN_S='ln -s' LTLIBOBJS='' M2HTML='' MAKEINFO='${SHELL} /sscc/opt/dynare-4.4.2/mex/build/matlab/missing --run makeinfo' MATLAB='/sscc/opt/matlab.r2014a' MATLAB_ARCH='glnxa64' MATLAB_CFLAGS='-fexceptions -fPIC -pthread -g -O2 -fno-omit-frame-pointer' MATLAB_CPPFLAGS='-I/sscc/opt/matlab.r2014a/extern/include' MATLAB_CXXFLAGS='-fPIC -pthread -g -O2 -fno-omit-frame-pointer' MATLAB_DEFS=' -D_GNU_SOURCE -DNDEBUG -DMATLAB_VERSION=0x2014' MATLAB_LDFLAGS='-shared -Wl,--no-undefined -Wl,-rpath-link,/sscc/opt/matlab.r2014a/bin/glnxa64 -L/sscc/opt/matlab.r2014a/bin/glnxa64 -Wl,--version-script,/sscc/opt/matlab.r2014a/extern/lib/glnxa64/mexFunction.map' MATLAB_LIBS='-lmx -lmex -lmat -lm -lstdc++ -lmwlapack -lmwblas' MATLAB_VERSION='r2014a' MEXEXT='.mexa64' MKDIR_P='/bin/mkdir -p' OBJEXT='o' PACKAGE='dynare' PACKAGE_BUGREPORT='' PACKAGE_NAME='dynare' PACKAGE_STRING='dynare 4.4.2' PACKAGE_TARNAME='dynare' PACKAGE_URL='' PACKAGE_VERSION='4.4.2' PATH_SEPARATOR=':' PTHREAD_CC='gcc' PTHREAD_CFLAGS='' PTHREAD_LIBS='' RANLIB='ranlib' SED='/bin/sed' SET_MAKE='' SHELL='/bin/sh' STRIP='' VERSION='4.4.2' ac_ct_AR='ar' ac_ct_CC='gcc' ac_ct_CXX='g++' ac_ct_F77='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' ax_pthread_config='' bindir='${exec_prefix}/bin' build='x86_64-unknown-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='unknown' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' host='x86_64-unknown-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /sscc/opt/dynare-4.4.2/mex/build/matlab/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='/bin/mkdir -p' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/sscc/opt/dynare-4.4.2' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "dynare" #define PACKAGE_TARNAME "dynare" #define PACKAGE_VERSION "4.4.2" #define PACKAGE_STRING "dynare 4.4.2" #define PACKAGE_BUGREPORT "" #define PACKAGE_URL "" #define PACKAGE "dynare" #define VERSION "4.4.2" #define HAVE_MATLAB 1 #define HAVE_PTHREAD 1 #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_LIBM 1 #define HAVE_LIBZ 1 configure: exit 0